Selected Journal Articles

Sorted by primary author.

Apitz, S.E., J.W. Davis, K. Finkelstein, D.W. Hohreiter, R. Hoke, R.H. Jensen, J. Jersak, V.J. Kirtay, E.E. Mack, V. Magar, D.W. Moore, D. Reible, and R.G. Stahl Jr. 2005. Assessing and managing contaminated sediments: Part I: Developing an Effective Investigation and Risk Evaluation Strategy. Integ. Environ. Assess. Manag. 1: 2-8.

Apitz, S.E., J.W. Davis, K. Finkelstein, D.W. Hohreiter, R. Hoke, R.H. Jensen, J. Jersak J, V.J. Kirtay, E.E. Mack, V. Magar, D.W. Moore, D., Reible, and R.G. Stahl, Jr. 2005. Assessing and managing contaminated sediments: Part II: Evaluating risk and monitoring sediment remedy effectiveness. Integ. Environ. Assess. Manag. 1: e1-e14. [online only]

Blake, A.C., D.B. Chadwick, A. Zirino, and I. Rivera-Duarte. 2004. Spatial and temporal variations in copper speciation in San Diego Bay. Estuaries 27(3): 437-447.

Boyd, T.J., D.M. Wolgast, I. Rivera-Duarte, O. Holm-Hansen, C.D. Hewes, A. Zirino, and D.B. Chadwick. 2005. Effects of dissolved and complexed copper on heterotrophic bacterial production in San Diego Bay. Microbial Ecol. 49(3): 353-366.

Chadwick, D.B., A. Gordon, J. Groves, C. Smith, R. Paulsen, and B. Harre. 2003. New tools for monitoring coastal contaminant migration. Sea Technol. 44(6): 17-22.

Chadwick, D.B., and J.L. Largier. 1999. The influence of tidal range on the exchange between San Diego Bay and the ocean. J. Geophys. Res. 104(C12): 29885-29899.

Chadwick, D.B., and J.L. Largier. 1999. Tidal exchange at the bay-ocean boundary, J. Geophys. Res. 104(C12): 29901-29924.

Chadwick, D.B., A. Zirino, I. Rivera-Duarte, C.N. Katz, and A.C. Blake. 2004. Modeling the mass balance and fate of copper in San Diego Bay. Limnol. Oceanogr. 49(2): 355-366.

Chadwick, D.B., S. Stanley, and S.H. Lieberman. 1994. Autonomous benthic lander for polluted bays and harbors. Sea Technol. 35(10): 10-16.

Chen, R.F., D.B. Chadwick, and S.H. Lieberman. 1997. The application of time-resolved spectrofluorometry to measuring benthic fluxes of organic compounds. Org. Geochem. 26(1/2): 67-77.

Cheng, R.T., C.H. Ling, J.W. Gartner, and P.F. Wang. 1999. Estimates of bottom roughness length and bottom shear stress in South San Francisco Bay, California. J. Geophys. Res. 104(C4): 7715-7728.

Cobb, G.P., D.M. Norman, M.W. Miller, L.W. Brewer, and R.K. Johnston. 1995. Chlorinated contaminants in chorio-allantoic membranes from great blue heron eggs at Whidbey Island Naval Air Station. Chemosphere 30(1): 151-164.

Gartner J.W., R.T. Cheng, P.F. Wang, and K.E. Richter. 2001. Laboratory and field evaluations of the LISST-100 instrument for suspended particle size determinations. Mar. Geol. 75: 199-219.

Huerta-Diaz, M.A., I. Rivera-Duarte, S.A. Sañudo-Wilhelmy, and A.R. Flegal. 2007. Comparative distributions of size fractionated metals in pore waters sampled by in-situ dialysis and whole-core sediment squeezing: Implications for diffusive flux calculations. Appl. Geochem. 22(11): 2509-2525.

Huggett, R.J., M.A. Unger, P.F. Seligman and A.O. Valkirs. 1992. The marine biocide tributyltin: assessing and managing the environmental risks. Environ. Sci. Technol. 26(2): 232-237.

Lapota, D., D.E. Rosenberger, M.F. Platter-Rieger and P.F. Seligman. 1993. Growth and survival of mussel larvae exposed to low levels of tributyltin and dibutyltin. Mar. Biol. 115(3): 413-419.

Johnston, R.K., W.R. Munns, P.L. Tyler, K. Finkelstein, K. Munney, P. Whittemore, A. Mellvile, and S. Hahn. 2002. Weighing the Evidence of Ecological Risk of Chemical Contamination in the Estuarine Environment Adjacent to the Portsmouth Naval Shipyard, Kittery, Maine, USA. Environ. Toxicol. Chem. (1): 182-194.

Katz, C.N., D.B. Chadwick, J. Rohr, M. Hyman, and D. Ondercin. 2003. Field measurements and modeling of dilution in the wake of a U.S. Navy frigate. Mar. Poll. Bull. 46(8): 991-1005.

Kirtay, V.J., J.H. Kellumm and S.E. Apitz. 1998. Field-portable X-ray fluorescence spectrometry for metals in marine sediments: results from multiple sites. Water Sci. Technol. 37(6-7): 141-148.

Kram, M.L., P.M. Stang and P.F. Seligman.1989. Adsorption and desorption of tributyltin in sediments of San Diego Bay and Pearl Harbor. Appl. Organomet. Chem. 3(6): 523-536.

Lapota, D., and J.R. Losee. 1984. Observations of bioluminescence in marine plankton from the Sea of Cortez. J. Exp. Mar. Biol. Ecol. 77(3): 209-240.

Lapota, D., C. Galt, J.R. Losee, H.D. Huddell, J.K. Orzech, and K.H. Nealson. 1988. Observations and measurements of planktonic bioluminescence in and around a milky sea. J. Exp. Mar. Biol. Ecol. 119: 55-81.

Lapota, D., D.E. Rosenberger, and S.H. Lieberman. 1992. Planktonic bioluminescence in the pack ice and the marginal ice zone of the Beaufort Sea. Mar. Biol. 112:665-675.

Lapota, D., D.K. Young, S.A. Bernstein, M.L. Geiger, H.D. Huddell, and J.F. Case. 1992. Diel bioluminescence in heterotrophic and photosynthetic marine dinoflagellates in an arctic fjord. J. Mar. Bio. Assoc. U.K. 72: 733-744.

Lapota, D., J.R. Losee, and M. Geiger. 1986. Bioluminescence displays induced by pulsed light. Limnol. Oceanog. 31(4): 887-889.

Lapota, D., M.L. Geiger, A.V. Stiffey, D.E. Rosenberger, and D.K. Young. 1989. Correlations of planktonic bioluminescence with other oceanographic parameters from a Norwegian fjord. Mar. Ecol. Prog. Ser. 55: 217-227.

Lapota, D., T.E. Bowman, and J.R. Losee. 1988. Observations on bioluminescence in the nauplius of Metridia longa (Copepoda, Calanoida) in the Norwegian Sea. Crustaceana 54(3): 314-320.

Lapota. D.1983. Observations of bioluminescence in the marine ostracod Cypridina americana (Muller, 1880) offshore of Manzanillo, Mexico (Myodocopa: Cypridininae). Proc. Biol. Soc. Washington 96(2): 307-308.

Lavin, M.F., G. Gaxiola, J.M. Robles, and K. Richter. 1995. Winter water-masses and nutrients in the northern Gulf of California. J. Geophys. Res. 100: 8587-8605.

Lee, R.F., A.O. Valkirs and P.F. Seligman. 1989. Importance of microalgae in the biodegradation of tributyltin in estuarine waters. Environ. Sci. Technol. 23(12): 1515-1518.

Lieberman, S.H., G.D. Gilbert, P.F. Seligman and A.W. Dibelka. 1984. Relationship between chlorophyll a fluorescence and underwater light transmission in coastal waters off southern California. Deep Sea Res. A 31(2): 171-180.

Lieberman, S.H. D. Lapota, J.R. Losee, and A. Zirino. 1986. Planktonic bioluminescence in the surface waters of the Gulf of California. Biol. Oceano. 4(1): 25-46.

Losee, J., K. Richter, S Lieberman, and D. Lapota. 1989. Bioluminescence: spatial statistics in the North Atlantic. Deep-Sea Res. 36(5): 783-801.

Mosier-Boss, P.A., and S.H. Lieberman. 2000. Detection of nitrate and sulfate anions by normal Raman spectroscopy and SERS of cationic-coated, silver substrates. Appl. Spectrosc. 54(8): 1126-1135.

Mosier-Boss, P.A., and S.H. Lieberman. 2003. Detection of volatile organic compounds using surface enhanced Raman spectroscopy substrates mounted on a thermoelectric cooler. Anal. Chim. Acta 488:15-23.

Mosier-Boss, P.A., and S.H. Lieberman. 2003. Surface-Enhanced Raman Spectroscopy (SERS) and molecular modeling of the chromate interaction with 4-(2-mercaptoethyl)pyridinium. Langmuir 19(17): 6826 -6836.

Mosier-Boss, P.A., R.D. Boss, and S.H. Lieberman. 2000. Determination of the ion-pair constant between chloride ion and cationic-coated, silver SERS substrates using competitive complexation, Langmuir 16(12): 5441-5448.

Mosier-Boss, P.A., S.H. Lieberman, and G.A. Theriault. 2002. Field demonstrations of a direct push FO-LIBS metal sensor, Environ. Sci. Tech. 36(18): 3968 -3976.

Mosier-Boss, P.A., S.H. Lieberman, J.M. Andrews, F.L. Rohwer, L.E. Wegley, and M. Breitbart. 2003. Use of fluorescently labeled phage in the detection and identification of bacterial species. Appl. Spectrosc. 57(9): 1138-1144.

Mosier-Boss, P.A., and S.H. Lieberman. 2005. Surface-enhanced Raman spectroscopy substrate composed of chemically modified gold colloid particles immobilized on magnetic microparticles. Anal. Chem. 77(4): 1031-1037.

Nacci, D., J. Serbst, T. Gleason, S. Cayula, G. Thursby, R.K. Johnston, and W.R. Munns Jr. 2000. Biological responses of the sea urchin, Arbacia puntulata, to lead contamination for an estuarine ecological risk assessment. J. Aquat. Ecosyst. Stress Recovery 7: 187-199.

Richter, K. 1985. Acoustic examination of small-scale zooplankton distributions at 1.2 MHz. Deep-Sea Res. 32:165-181.

Richter, K. 1985. Acoustic scattering at 1.2 MHz from individual zooplankters and copepod populations. Deep-Sea Res. 32:141-165.

Richter, K., J. Bennett, and K. L. Smith. 1985. Bottom-moored acoustic array to monitor density and vertical movement of deep-sea benthopelagic animals. IEEE J. Ocean. Eng. 10(1): 32-37.

Rivera-Duarte I. and A. Zirino. 2004. Response of the Cu(II) ion selective electrode to Cu titration in artificial and natural shore seawater and in the measurement of the Cu complexation capacity. Environ. Sci. Technol. 38(11): 3139-3147.

Rivera-Duarte, I., G. Rosen, D. Lapota, D.B. Chadwick, L. Kear-Padilla, and A. Zirino. 2005. Copper toxicity to larval stages of three marine invertebrates and copper complexation capacity in San Diego Bay, California. Environ. Sci. Tech. 39(6): 1542-1546.

Rosen, G., and G.R. Lotufo. 2005. Toxicity and fate of two munitions constituents in spiked sediment exposures to marine amphipod Eohaustorius estuarius. Environ. Toxicol. Chem. 24(11): 2887-2897.

Rosen, G., and G. Lotufo. 2007. Bioaccumulation of explosive compounds in the marine mussel, Mytilus galloprovincialis. Ecotoxicol. Environ. Saf. 68(2): 228-236.

Rosen, G., and G. Lotufo. 2007. Toxicity of explosive compounds to the marine mussel, Mytilus galloprovincialis, in aqueous exposures. Ecotoxicol. Environ. Saf. 68(2): 237-245.

Rosen, G., and G. Lofuto. 2010. Fate and effects of Composition B in multispecies marine exposures. Environ. Toxicol. Chem. 29(6): 1330-1337.

Rosen, G., A. Osorio-Robayo, I. Rivera-Duarte, and D. Lapota. 2007. Comparison of bioluminescent dinoflagellate (QwikLite) and bacterial (Microtox) rapid bioassays for the detection of metal and ammonia toxicity. Arch. Environ. Contam. Toxicol. 54(4): 606-611.

Rosen, G., I. Rivera-Duarte, D.B. Chadwick, A. Ryan, R.C. Santore, and P.R. Paquin. 2008. Critical tissue copper residues for marine bivalve (Mytilus galloprovincialis) and echinoderm (Strongylocentrotus purpuratus) embryonic development: Conceptual, regulatory and environmental implications. Mar. Environ. Res. 66(3): 327-336.

Rosen, G., I. Rivera-Duarte, L. Kear-Padilla, and D.B. Chadwick. 2005. Use of laboratory toxicity tests with bivalve and echinoderm embryos to evaluate the bioavailability of copper to in San Diego Bay, California, USA. Environ. Toxicol. Chem. 24(2): 415-422.

Schiff, K., D. Diehl, and A. Valkirs. 2004. Copper emissions from antifouling paint on recreational vessels. Mar. Poll. Bull. 48(3-4): 371-377.

Seligman, P.F., J.G. Grovhoug, A.O. Valkirs, P.M. Stang, P.M., R.L. Fransham, M.O. Stallard, B.M. Davidson, and R.F. Lee. 1989. Distribution and fate of tributyltin in the United States marine environment. Appl. Organomet. Chem. 3(1): 31-47.

Seligman, P.F., A.O. Valkirs, and R.F. Lee. 1986. Degradation of tributyltin in San Diego Bay, California, waters. Environ. Sci. Tech. 20(12): 1229-1235.

Seligman, P.F., A.O. Valkirs, P.M. Stang and R.F. Lee. 1988. Evidence for rapid degradation of tributyltin in a marina. Mar. Poll. Bull. 19(10): 531-534.

Stang, P.M., D.R. Bower, and P.F. Seligman. 1989. Stratification and tributyltin variability in San Diego Bay. Appl. Organomet. Chem. 3(5): 411-416.

Stang, P., R. Lee and P. Seligman. 1992. Evidence for rapid, non-biological degradation of tributyltin in fine-grained sediments. Environ. Sci. Technol. 26(7): 1382-1387.

Steinert, S.A. 1996. Contribution of apoptosis to observed DNA damage in mussel cells. Mar. Environ. Res. 42: 253-259.

Steinert, S.A. 1999. DNA Damage as Bivalve Biomarker and as an Environmental Assessment Tool. Biomarkers 4(6): 492.

Steinert, S.A. and G.V. Pickwell. 1993. Induction of HSP70 proteins in mussels by ingestion of tributyltin. Mar. Environ. Res. 35(1-2): 89-93.

Steinert, S.A., and G.V. Pickwell. 1988. Expression of heat shock proteins and metallothionein in mussels exposed to heat stress and metal ion challenge. Mar. Environ. Res. 24: 211-214.

Steinert, S.A., R. Streib-Montee, and M.P. Sastre. 1998. Influence of sunlight on DNA damage in mussels exposed to polycyclic aromatic hydrocarbons. Mar. Environ. Res. 46: 355-358.

Steinert, S.A., R. Streib-Montee, J.M. Leather, and D.B. Chadwick. 1998. DNA damage in mussels at sites in San Diego Bay. Mutation Res. 399: 65-85.

Tengberg, A., F. De Bovee, P. Hall, W. Berelson, D. Chadwick, G. Ciceri, P. Crassous, A. Devol, S. Emerson, J. Gage, R. Glud, F. Graziottini, J. Gundersen, D. Hammond, W. Helder, K. Hinga, O. Holby, R. Jahnke, A. Khripounoff, S. Lieberman, V. Nuppenau, O. Pfannkuche, C. Reimers, G. Rowe, A. Sahami, F. Sayles, M. Schurter, D. Smallman, B. Wehrli, and P. De Wilde.1995. Benthic chamber and profiling landers in oceanography - A review of design, technical solutions and functioning. Prog. Oceanogr. 35(3): 253-294.

Valkirs, A.O., B.M. Davidson, L.L. Kear, R.L. Fransham, J.G. Grovhoug, and P.F. Seligman. 1991. Long term monitoring of tributyltin in San Diego Bay California. Mar. Environ. Res. 32: 151-167.

Valkirs, A.O., B.M. Davidson, and P.F. Seligman. 1987. Sublethal growth effects and mortality to marine bivalves from long-term exposure to tributyltin. Chemosphere 16(1): 201-220.

Valkirs, A.O., P.F. Seligman, E. Haslbeck, J.S. Caso. 2003. Measurement of copper release rates from antifouling paint under laboratory and in situ conditions: implications for loading estimation to marine water bodies. Mar. Poll. Bull. 46(6): 763-779.

Valkirs, A.O., P.F. Seligman, P.M. Stang, V. Homer, S.H. Lieberman, G. Vafa and C.A. Dooley. 1986. Measurement of butyltin compounds in San Diego Bay. Mar. Poll. Bull. 17(7): 319-324.

Valkirs, A.O., M.O. Stallard, P.M. Stang, S. Frank, and P.F. Seligman. 1990. An assessment of frozen storage of tributyltin in seawater samples using hydride derivatization. Analyst 115(10): 1327-1328.

Wang, P.F., T. Mill, J.A. Martin, T.A. Wool. 1997. Fate and Transport of Metam Spill in Sacramento River. J. Environ. Eng. 123(7): 704-712.

Wang, P.F., R.T. Cheng, K. Richter, E.S. Gross, D. Sutton, and J. Gartner. 1998. Modeling tidal hydrodynamics of San Diego Bay, California. J. Amer. W. Res. Assoc. 34(5): 1123-1140.

Wang, P.F., T. Mill, J.L. Martin, and T.A. Wool. 1998. Closure to "Fate and Transport of Metam Spill in Sacramento River” by P.F. Wang, T. Mill, J.L. Martin, and T.A. Wool." J. Environ. Eng. 124(10): 1027-1028.

Wang, B., Q. Liao, H.A. Bootsma, and P.F. Wang. 2012. A dual-beam dual-camera method for a battery-powered underwater miniature PIV (UWMPIV) system. Exp. Fluids 52(6): 1401-1414.

Wang, P.F., J. Martin, T. Wool, and G. Morrison, 1999. Water quality and eutrophication in Tampa Bay, Florida. Estuar. Coast. Shelf Sci. 49(1) 1-20.

Wang, P.F. 2001. Dispersion resulting from aggregating hydrodynamic properties in water quality modeling. Int. J. Eng. Sci. 39(1): 95-112.

Wang, P.F., C. O’Connor, G. Watabayashi, and W. Choi. 2012. Better planning and decision support for oil spills in navy harbours. J. Ocean Technol. 7(4): 13-21. [alternate site]

Zirino, A.R., C. Clavell, and P.F. Seligman. 1978. Real-time analysis in chemical oceanography. Naval Res. Rev. 21(6): 26-38.

Zirino, A., R.A. Fuhrmann, D. Oksanen-Gooden, S.H. Lieberman, C. Clavell, P.F. Seligman, J.H. Mathewson, W.D. Jones, J. Kogelschatsz and T.R. Barber. 1986. pH-temperature - nutrient relationships in the Eastern Tropical Pacific Ocean. Sci. Total Environ. 58(1-2): 117-137.

Zirino, A., R. De Marco, I. Rivera-Duarte, and B. Pejcic. 2002. The influence of diffusion fluxes on the detection limit of the jalpaite copper ion-selective electrode. Electroanalysis 14(7-8): 493-498.

Zirino, A., D.A. VanderWeele, S.L. Belli, R. DeMarco, and D.J. Mackey. 1998. Direct measurement of Cu(II)aq in seawater at pH 8 with the jalpaite ion-selective electrode. Mar. Chem. 61(3-4): 173-184.